May as well wait for the roster update so everyone will have their players the way they should be. I checked the league after the sim though and everything seemed to be in order.
Every game that was simmed ended as 0-0 and none were included in the teams' records. Gave teams with no simmed games an advantage. Also, we figured that continuing to play a glitched league was just asking for more problems later on, when even more time will have been invested.